BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A11SP1|AL427709
(566 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 1011 0.0
>3x_Contig1622
Length = 13445
Score = 1011 bits (508), Expect = 0.0
Identities = 552/563 (98%), Gaps = 5/563 (0%)
Strand = Plus / Minus
Query: 1 tcatcatgcattatgtttkttccatacggcgaacccggagttgttgaaatactccgagca 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2794 tcatcatgcattatgtttgttccatacggcgaacccggagttgttgaaatactccgagca 2735
Query: 61 tcttcagcgacaaatgggtactttttgacaggcgggaagaaatggtctacaagttcatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2734 tcttcagcgacaaatgggtactttttgacaggcgggaagaaatggtctacaagttcatta 2675
Query: 121 atatggatgtaggaacttttgtatcctgctagctctagtaattccatatgtacttcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 atatggatgtaggaacttttgtatcctgctagctctagtaattccatatgtacttcccca 2615
Query: 181 tcagggttgatagtgaaaatacgagaacttggaataccaacggttctatacgacaaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 tcagggttgatagtgaaaatacgagaacttggaataccaacggttctatacgacaaggca 2555
Query: 241 tctgtgatacgattgccaaaaccagcaataaaaggagttggcatctcatcagcatcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2554 tctgtgatacgattgccaaaaccagcaataaaaggagttggcatctcatcagcatcatct 2495
Query: 301 tttcggttattagattctgggaaatacaatgccttcatgtcttttaaacatgcgattttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 tttcggttattagattctgggaaatacaatgccttcatgtcttttaaacatgcgattttg 2435
Query: 361 aacacttcaggtttctttagaatmacttcccttcgcaatgctgncattgttctatctggn 420
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 2434 aacacttcaggtttctttagaataacttcccttcgcaatgctgccattgttctatctggc 2375
Query: 421 gagagaataaccggcccaatgggtaactgtacaaccattttgtacaatacttcttaggta 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2374 gagagaataaccggcccaatgggtaa-tgtacaaccattttgtacaatacttcttaggta 2316
Query: 481 agakcttgtggaatcacgattgtcctgccgtcctggnagttaaactacatgatgttatac 540
||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 2315 agatcttgtggaatca-gattgtcctgccgtcctggcagttaaa-tacatgatgttata- 2259
Query: 541 gccgtttccctctgatttctgta 563
|||| ||||||||||||||||||
Sbjct: 2258 gccg-ttccctctgatttctgta 2237
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3181
Number of Sequences: 1807
Number of extensions: 3181
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 566
length of database: 10,358,551
effective HSP length: 16
effective length of query: 550
effective length of database: 10,329,639
effective search space: 5681301450
effective search space used: 5681301450
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)